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GINsim / GINsim-python

Python bindings for GINsim and bioLQM
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BioLQM models should have an associated initial state #19

Open jonrkarr opened 3 years ago

jonrkarr commented 3 years ago

Running simulations with synchronous updating produces the same results from SBML files with different initialLevels.

aurelien-naldi commented 3 years ago

Yes, it does ignore it as bioLQM models have no internal state (SBML is the only input format specifying an initial level). It would be nice to support it, at least for simulations, maybe in other places as well.

aurelien-naldi commented 3 years ago

As stated in #18, the addition of an initial state to the model itself would require the addition of getter/setters for this new object