AWI method fastq to biom

GLOMICON / asvBiomXchange

A repository to develop an exchange format for molecular biodiversity data

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AWI method fastq to biom #9

Open PyoneerO opened 5 years ago

PyoneerO commented 5 years ago

Hello, thanks for invitation to contribute. Below you find the link to the repo of the pipeline used for many amplicon analyses at the AWI (www.awi.de). https://github.com/PyoneerO/qzip Best Stefan

pbuttigieg commented 5 years ago

Many thanks @PyoneerO!

I've forked this into the GLOMICON org so it's in our index.

We're discussing how to best share these workflows/pipelines across observatories (e.g. #11). Happy to hear your thoughts there!

pbuttigieg commented 5 years ago

I see the Qzip pipeline is already installable with a dockerfile - could you note this in #11?