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GMOD / Apollo

Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
http://genomearchitect.readthedocs.io/
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Unable to change boundaries for TE and RR using 'Details' panel. #1684

Closed monicacecilia closed 6 years ago

monicacecilia commented 6 years ago

Transposable Elements (TE) and Repeat Regions (RE) do not have 'exons', and thus no child elements for those annotations; is this the reason why the 'Details' panel in the bottom half of the 'Annotator Panel' does not have a 'Coding' tab where curators can change the coordinates on a base pair by base pair manner?

Note that it is not possible to select a child element (sub-type annotation?) in the list of 'Annotations' for these annotation types.

screen shot 2017-07-06 at 5 53 31 pm

If so, we should remove the note "13.1.2.3) Repeat for Repeat Region and Transposable Element" from the Testing Script.

deepakunni3 commented 6 years ago

@monicacecilia Yes, that is correct.

Coding tab is only for gene features.

monicacecilia commented 6 years ago

Brilliant. Thanks! I updated the testing script accordingly.