GMOD / Apollo3

JBrowse 2 plugin for editing annotations on an Apollo server
Apache License 2.0
7 stars 4 forks source link

New feature model #390

Closed shashankbrgowda closed 2 months ago

garrettjstevens commented 4 months ago

@shashankbrgowda I looked at cdsLocations vs getDiscontinuousLocations, and I'm not sure what the difference is you're seeing. One thing to maybe note is that cdsLocations can return multiple location arrays for one parent feature. For example, if an mRNA has two CDS children, cdsLocations would return e.g.

[
  [
    {"min": 3300, "max": 3902, "phase": 0},
    {"min": 4999, "max": 5500, "phase": 1},
    {"min": 6999, "max": 7600, "phase": 1}
  ],
  [
    {"min": 3390, "max": 3902, "phase": 0},
    {"min": 4999, "max": 5500, "phase": 1},
    {"min": 6999, "max": 7600, "phase": 1}
  ]
]
garrettjstevens commented 2 months ago

Superseded by #412