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GMOD / jblast-jbconnect-hook

JBrowse/Galaxy-Blast Plugin
http://jblast.readthedocs.io
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define blastProfile from workflow profile #284

Closed enuggetry closed 4 years ago

enuggetry commented 4 years ago 
        jblast: {
            blastProfiles: {
                'wheat': {
                    'db': 'wheat',
                    'max_hsps':10
                }
            }

        },
        workflowFilter: {
            galaxy: {
                "sample_data/json/volvox": {
                    nameFilter: ".2"
                },
                "IWGSC": {
                    nameFilter: ".1"
                }
            },
            "IWGSC": {
                filter: ".blast.wf",
                defaultBlastProfile: "wheat" <---- (new)
            }
        }
enuggetry commented 4 years ago

this also fixed a portion of the code where the blast profile was not being passed to the workflow script in blast-wheat.blast.wf.js