GMOD / jbrowse-components

Source code for JBrowse 2, a modern React-based genome browser
https://jbrowse.org/jb2
Apache License 2.0
208 stars 62 forks source link

Make initial linear synteny view import form submit show all regions by default #4422

Closed cmdcolin closed 5 months ago

cmdcolin commented 5 months ago

fixes https://github.com/GMOD/jbrowse-components/issues/4372

alternative approaches or add-ons to this PR could be taken include

a) allowing user to use a refname autocomplete on the import form before submitting b) allow user to tailor the set of chromosomes displayed in some way (similar to https://github.com/GMOD/jbrowse-components/issues/2063) which could help for very fragmented e.g. hundreds of thousands of scaffolds scenarios

the default output comparing hg19 vs hg38 looks like so after this PR

image