Dotplot show all regions slightly inaccurate after submitting import form

GMOD / jbrowse-components

Source code for JBrowse 2, a modern React-based genome browser

https://jbrowse.org/jb2

Apache License 2.0

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Dotplot show all regions slightly inaccurate after submitting import form #4424

Open cmdcolin opened 3 months ago

cmdcolin commented 3 months ago

After submitting the import form, it tries to show all regions in the dotplot (for both x and y axes) but it often does not fully encompass this. The reasoning may be a little unclear, possibly (unconfirmed) due to the area where the refnames in the dotplot's width/height values autorun still resolving (sometimes it goes through several iterations)

possible fixes could include

trying to remove the several iterations of autorun
tracking down the cause more precisely

cmdcolin commented 3 months ago

example:

immediately after submitting an hg19 vs hg38 dotplot

after submitting the 'show all regions' menu item from the vertical ... a second time