Closed cmdcolin closed 1 month ago
of course, one could consider adding 'protein coloring schemes' on the reference sequence track, but there are many of these....
see also this related PR showing some protein browser demo data fetched from uniprot https://github.com/GMOD/jbrowse-plugin-protein3d/pull/14
This is a manually configured setting (e.g. not auto-detected from the fasta file) that lets a user configure a reference sequence to have a non-dna sequence type
This, if sequenceType!=='dna', then it disables the showTranslation/showForward/showReverse settings on the sequence track, and the "DNA coloring scheme" for the sequence letters. This works well for making a protein type browser
example screenshot
example config