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GMOD / jbrowse

JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
http://jbrowse.org
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Optimization for BAM and MD generation #1533

Closed cmdcolin closed 3 years ago

cmdcolin commented 3 years ago

This includes the performance update included in jb2 from https://jsperf.com/md-parsing and also allows MD generation from BAM files with no MD tag

cmdcolin commented 3 years ago

The paired read track is failing for some reason, unclear why...

cmdcolin commented 3 years ago

To be clear, the paired read test in BAM.spec.js is failing, track in volvox sample data works fine