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GMOD / jbrowse

JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
http://jbrowse.org
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Gene spans track from maker2jbrowse error #1548

Open cmdcolin opened 4 years ago

cmdcolin commented 4 years ago

From http://jbrowse.org/demos/yeast_pilon_jbrowse_datadir.tar.gz

Screenshot from 2020-09-24 12-25-07

cmdcolin commented 4 years ago

Appears to be related to the use of the --noSubfeatures flag

Results in attributes named "start" which has a stringified number on the feature so feature.get('start') returns a string

cmdcolin commented 4 years ago

@domenico-simone removing --noSubfeatures line from the bin/maker2jbrowse script can fix for now. See #1554 PR for a simple fix

Would need another investigation to completely figure out why noSubfeatures is non functional

cmdcolin commented 4 years ago

could also git bisect to find when if ever this was working :)