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GMOD / jbrowse

JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
http://jbrowse.org
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Extract Spliced Gene sequences (without introns) #910

Closed deepak31a closed 6 years ago

deepak31a commented 7 years ago

HI.. I am using JBrowse platform for browsing genome of my organism. I have set tracks of Genome and Genes. I can see the gene features and able to see the sequences of genes (with CDS and Introns) and multiple CDS (within on gene). But I am not able to see the Spliced Gene sequences (All CDS sequences, without introns as one complete CDS of the gene). Could anyone please help me to achieve this. Thanks in advance, best regards' Deepak

colindaven commented 7 years ago

Hi, you can use the FeatureSequence plugin for this:

https://gmod.github.io/jbrowse-registry/#!?page=2

Best wishes, Colin