[BUG] metadata-generation-failed

[gen-li]

Describe the bug Collecting deepparse[app] Using cached deepparse-0.9.12-py3-none-any.whl.metadata (25 kB) Requirement already satisfied: numpy<2.0.0 in /opt/anaconda3/lib/python3.12/site-packages (from deepparse[app]) (1.26.4) Requirement already satisfied: torch in /opt/anaconda3/lib/python3.12/site-packages (from deepparse[app]) (2.4.1) Collecting bpemb (from deepparse[app]) Using cached bpemb-0.3.5-py3-none-any.whl.metadata (19 kB) Collecting scipy<=1.10.1 (from deepparse[app]) Using cached scipy-1.9.3.tar.gz (42.1 MB) Installing build dependencies ... done Getting requirements to build wheel ... done Installing backend dependencies ... done Preparing metadata (pyproject.toml) ... error error: subprocess-exited-with-error

× Preparing metadata (pyproject.toml) did not run successfully. │ exit code: 1 ╰─> [40 lines of output]

• meson setup /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-pm0emj9q/scipy_95d22f3313394ae88360cc627ecfbef3 /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-pm0emj9q/scipy_95d22f3313394ae88360cc627ecfbef3/.mesonpy-9osi9ko5 -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --native-file=/private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-pm0emj9q/scipy_95d22f3313394ae88360cc627ecfbef3/.mesonpy-9osi9ko5/meson-python-native-file.ini The Meson build system Version: 1.5.1 Source dir: /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-pm0emj9q/scipy_95d22f3313394ae88360cc627ecfbef3 Build dir: /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-pm0emj9q/scipy_95d22f3313394ae88360cc627ecfbef3/.mesonpy-9osi9ko5 Build type: native build Project name: SciPy Project version: 1.9.3 C compiler for the host machine: cc (clang 15.0.0 "Apple clang version 15.0.0 (clang-1500.3.9.4)") C linker for the host machine: cc ld64 1053.12 C++ compiler for the host machine: c++ (clang 15.0.0 "Apple clang version 15.0.0 (clang-1500.3.9.4)") C++ linker for the host machine: c++ ld64 1053.12 Host machine cpu family: aarch64 Host machine cpu: aarch64 Compiler for C supports arguments -Wno-unused-but-set-variable: YES Compiler for C supports arguments -Wno-unused-but-set-variable: YES (cached) Compiler for C supports arguments -Wno-unused-function: YES Compiler for C supports arguments -Wno-conversion: YES Compiler for C supports arguments -Wno-misleading-indentation: YES Compiler for C supports arguments -Wno-incompatible-pointer-types: YES Library m found: YES

  ../meson.build:57:0: ERROR: Unknown compiler(s): [['gfortran'], ['flang'], ['nvfortran'], ['pgfortran'], ['ifort'], ['ifx'], ['g95']] The following exception(s) were encountered: Running gfortran --version gave "[Errno 2] No such file or directory: 'gfortran'" Running gfortran -V gave "[Errno 2] No such file or directory: 'gfortran'" Running flang --version gave "[Errno 2] No such file or directory: 'flang'" Running flang -V gave "[Errno 2] No such file or directory: 'flang'" Running nvfortran --version gave "[Errno 2] No such file or directory: 'nvfortran'" Running nvfortran -V gave "[Errno 2] No such file or directory: 'nvfortran'" Running pgfortran --version gave "[Errno 2] No such file or directory: 'pgfortran'" Running pgfortran -V gave "[Errno 2] No such file or directory: 'pgfortran'" Running ifort --version gave "[Errno 2] No such file or directory: 'ifort'" Running ifort -V gave "[Errno 2] No such file or directory: 'ifort'" Running ifx --version gave "[Errno 2] No such file or directory: 'ifx'" Running ifx -V gave "[Errno 2] No such file or directory: 'ifx'" Running g95 --version gave "[Errno 2] No such file or directory: 'g95'" Running g95 -V gave "[Errno 2] No such file or directory: 'g95'"

  A full log can be found at /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-pm0emj9q/scipy_95d22f3313394ae88360cc627ecfbef3/.mesonpy-9osi9ko5/meson-logs/meson-log.txt [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip. error: metadata-generation-failed

× Encountered error while generating package metadata. ╰─> See above for output.

note: This is an issue with the package mentioned above, not pip. hint: See above for details.

Desktop (please complete the following information):

• OS: Mac OS 14.6.1 (23G93)
• Version 14.6.1 (23G93)

[github-actions[bot]]

Thank you for you interest in improving Deepparse.

[MAYAS3]

Hello @gen-li,

Pip seems to have an issue building Scipy. Could you try to reinstall without using your cached version by running pip install --no-cache-dir deepparse[app] ?

If it doesn't solve the issue, please let me know the python version you're using and whether you're on Intel or Apple Silicon.

[gen-li]

Hi @MAYAS3 ,

Thanks for your help. The issue still exists.

I am using Apple Silicon. The python version is Python 3.12.4

Here is the error from the new try.

Collecting deepparse[app] Downloading deepparse-0.9.12-py3-none-any.whl.metadata (25 kB) Requirement already satisfied: numpy<2.0.0 in /opt/anaconda3/lib/python3.12/site-packages (from deepparse[app]) (1.26.4) Requirement already satisfied: torch in /opt/anaconda3/lib/python3.12/site-packages (from deepparse[app]) (2.4.1) Collecting bpemb (from deepparse[app]) Downloading bpemb-0.3.5-py3-none-any.whl.metadata (19 kB) Collecting scipy<=1.10.1 (from deepparse[app]) Downloading scipy-1.9.3.tar.gz (42.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 42.1/42.1 MB 115.1 MB/s eta 0:00:00 Installing build dependencies ... done Getting requirements to build wheel ... done Installing backend dependencies ... done Preparing metadata (pyproject.toml) ... error error: subprocess-exited-with-error

× Preparing metadata (pyproject.toml) did not run successfully. │ exit code: 1 ╰─> [32 lines of output]

• meson setup /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-veetdw1x/scipy_f167dd7b262048959334228c26bd6826 /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-veetdw1x/scipy_f167dd7b262048959334228c26bd6826/.mesonpy-x3_t_09d -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --native-file=/private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-veetdw1x/scipy_f167dd7b262048959334228c26bd6826/.mesonpy-x3_t_09d/meson-python-native-file.ini The Meson build system Version: 1.5.1 Source dir: /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-veetdw1x/scipy_f167dd7b262048959334228c26bd6826 Build dir: /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-veetdw1x/scipy_f167dd7b262048959334228c26bd6826/.mesonpy-x3_t_09d Build type: native build Project name: SciPy Project version: 1.9.3 C compiler for the host machine: cc (clang 15.0.0 "Apple clang version 15.0.0 (clang-1500.3.9.4)") C linker for the host machine: cc ld64 1053.12 C++ compiler for the host machine: c++ (clang 15.0.0 "Apple clang version 15.0.0 (clang-1500.3.9.4)") C++ linker for the host machine: c++ ld64 1053.12 Host machine cpu family: aarch64 Host machine cpu: aarch64 Compiler for C supports arguments -Wno-unused-but-set-variable: YES Compiler for C supports arguments -Wno-unused-but-set-variable: YES (cached) Compiler for C supports arguments -Wno-unused-function: YES Compiler for C supports arguments -Wno-conversion: YES Compiler for C supports arguments -Wno-misleading-indentation: YES Compiler for C supports arguments -Wno-incompatible-pointer-types: YES Library m found: YES Fortran compiler for the host machine: gfortran (gcc 14.2.0 "GNU Fortran (Homebrew GCC 14.2.0) 14.2.0") Fortran linker for the host machine: gfortran ld64 530 Compiler for Fortran supports arguments -Wno-conversion: YES Program cython found: YES (/private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-build-env-6txee1de/overlay/bin/cython) Program pythran found: YES (/private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-build-env-6txee1de/overlay/bin/pythran) Program cp found: YES (/bin/cp) Program python found: YES (/opt/anaconda3/bin/python)

  ../meson.build:85:2: ERROR: Problem encountered: Your Python version is too new. SciPy 1.9 supports Python 3.8-3.11; if you are trying to build from source for the most recent SciPy version you may hit this error as well. Please build from the main branch on GitHub instead.

  A full log can be found at /private/var/folders/0v/nkjttv413cgb2b1z262v54rm0000gn/T/pip-install-veetdw1x/scipy_f167dd7b262048959334228c26bd6826/.mesonpy-x3_t_09d/meson-logs/meson-log.txt [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip. error: metadata-generation-failed

× Encountered error while generating package metadata. ╰─> See above for output.

note: This is an issue with the package mentioned above, not pip. hint: See above for details.

[MAYAS3]

Hi @gen-li,

I've made a new release that allows for newer versions of Scipy that support python 3.12. Could you try again (pip install --no-cache-dir deepparse[app])?

[gen-li]

It works now! Cool! Thanks so much!

Best,

Gen

On Thu, Sep 12, 2024 at 3:27 PM Marouane Yassine @.***> wrote:

[CAUTION: Non-UBC Email]

Hi @gen-li https://github.com/gen-li,

I've made a new release that allows for newer versions of Scipy that support python 3.12. Could you try again (pip install --no-cache-dir deepparse[app])?

— Reply to this email directly, view it on GitHub https://github.com/GRAAL-Research/deepparse/issues/235#issuecomment-2347348825, or unsubscribe https://github.com/notifications/unsubscribe-auth/AK7MSCTW4PSHX4637WCZLMTZWIIJ7AVCNFSM6AAAAABOD4M352VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDGNBXGM2DQOBSGU . You are receiving this because you were mentioned.Message ID: @.***>

[MAYAS3]

Great! Enjoy Deepparse!