GSTT-CSC / hazen

Quality assurance framework for Magnetic Resonance Imaging
https://github.com/GSTT-CSC/hazen
Apache License 2.0
22 stars 12 forks source link

Add output path #260

Closed laurencejackson closed 2 years ago

laurencejackson commented 2 years ago

Adds output path to hazenlib tasks

returns paths to report objects in results dictionary, so these can be accessed in website UI.

github-actions[bot] commented 2 years ago

Coverage

Coverage Report
FileStmtsMissCoverMissing
hazenlib
   HazenTask.py24388%29–31
   init.py1423575%135, 139, 149, 154, 191, 198–203, 214, 217–224, 244–246, 264–266, 285–287, 296, 301, 307, 355, 378–379, 383
   acr_uniformity.py923958%91–107, 114–143, 147
   relaxometry.py3179072%238–256, 630, 689–691, 745, 793–815, 833–848, 1173–1176, 1185–1188, 1200–1213, 1216–1221, 1233–1263
   shapes.py20955%13, 16, 24–29, 32
   snr_map.py108595%403, 408–410, 440
   tools.py82693%43–50, 89
hazenlib/tasks
   ghosting.py1505166%18–32, 47, 109–110, 114, 124–125, 151–153, 170–172, 218–256
   relaxometry.py7271%10–11
   slice_position.py1172182%31, 40–41, 103–104, 130, 210, 217–233
   slice_width.py3595286%34–37, 107, 166–186, 451, 456–457, 463, 468, 530–531, 780–821
   snr.py1634672%62–67, 221–231, 273–277, 314–327, 332–340, 369–382
   spatial_resolution.py2959069%36–39, 63–121, 134, 219, 255–262, 287, 413–449
   uniformity.py781976%42–45, 91–92, 99, 133–147
TOTAL199046876% 

Tests Skipped Failures Errors Time
176 0 :zzz: 0 :x: 0 :fire: 2m 2s :stopwatch: