Polishing scripts - Githubissues

GW-HIVE / biomuta-old

Documentation: https://biomuta.readthedocs.io/en/latest/

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Open mariacuria opened 1 week ago

mariacuria commented 1 week ago

[ ] Use the utils module to navigate to config.json in scripts that use config.json
[ ] Replace hardcoded paths with config.json paths
[ ] Move processing scripts to convert_step2/cbioportal
[ ] Add which script goes after which in README.md