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GWeindel
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hmp
Repository for the hmp python package
BSD 3-Clause "New" or "Revised" License
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Added section on already stim-resp epoched data
#49
jelmerborst
closed
1 year ago
0
TQDM uses notebook context by default, shoulb be adapted to users environment
#48
GWeindel
closed
1 year ago
1
Resolving a bug.
#47
dmkhitaryan
closed
1 year ago
0
Update README.md
#46
jelmerborst
closed
1 year ago
0
Implement multiprocessing in the bootstrapping function
#45
GWeindel
closed
1 year ago
1
Update README.md
#44
GWeindel
closed
1 year ago
0
Resolving issue #42
#43
dmkhitaryan
closed
1 year ago
0
Threshold argument in utils.bootstrapping
#42
dmkhitaryan
closed
1 year ago
1
Issue during transformation of data for HMP with 2+ participants
#41
dmkhitaryan
closed
1 year ago
1
Low-pass filtering of the data is not necessary
#40
GWeindel
closed
1 year ago
0
backward_estimation causes error when called
#39
GWeindel
closed
1 year ago
1
Random generation of starting points yields RuntimeWarning because of starting points larger than the mean RT
#38
GWeindel
closed
1 year ago
7
New version coming in January, Install from pip instead of github
#37
GWeindel
closed
1 year ago
0
Removing mp parameter in single_fit()
#36
GWeindel
closed
1 year ago
0
Single core support for hsmm.backward_estimation()
#35
JoKra1
closed
1 year ago
1
Using hsmm.backward_estimation() as starting point for LOOCV might be biased
#34
JoKra1
closed
1 year ago
8
Extracting x,y electrode positions from MNE montage is not to be trusted for now
#33
GWeindel
closed
1 day ago
0
Write the function/example for condition-wise LOOCV and update tutorial 4
#32
GWeindel
closed
1 year ago
1
Write documentation to visu module
#31
GWeindel
closed
2 years ago
0
Multiprocessing LOOCV mode illustrated in tutorial 3 should be implemented as a function to ease its usage
#30
GWeindel
closed
2 years ago
0
Moving data loading to dask to speed up and reduce RAM usage
#29
GWeindel
closed
1 year ago
2
Provide an example on how to use event times as annotations/triggers in MNE
#28
GWeindel
closed
2 years ago
1
Slow execution time of compute_topo
#27
GWeindel
closed
1 year ago
2
Add possibility to not test the LOOCV
#26
GWeindel
closed
2 years ago
1
Possibility for only one stage to be estimated
#25
GWeindel
closed
2 years ago
0
Thresholding the epochs using mne's autoreject
#24
GWeindel
closed
2 years ago
1
Inconsistencies in reconstruct function
#23
GWeindel
closed
2 years ago
0
Add possibility to estimate two different gammas across conditions
#22
GWeindel
closed
2 years ago
0
Simplify plot_topo
#21
GWeindel
closed
2 years ago
1
Constant added to eventprob?
#20
GWeindel
closed
2 years ago
2
Implement alternative EEGLAB color code to ease comparison with previous applications
#19
GWeindel
closed
2 years ago
0
Implementing function to read EEGLAB preprocessed data
#18
GWeindel
closed
2 years ago
0
Selecting conditions without string matching
#17
GWeindel
closed
1 year ago
1
Xlabel crashing plot_topomap function
#16
GWeindel
closed
2 years ago
1
Moving the data feed to HsMM from initial stacked data + starts and ends to more xarray compatible data format
#15
GWeindel
closed
1 year ago
1
The weights of the PCA on electrodes should be stored in the model
#14
GWeindel
closed
2 years ago
1
Fit object should be a xr.Dataset and contain estimates as separate xr.DataArray
#13
GWeindel
closed
2 years ago
0
Implement 0-bump model likelihood estimation
#12
GWeindel
closed
2 years ago
0
Likelihood profiles is off compared to expected
#11
GWeindel
closed
2 years ago
0
Use eventprobs and gamma_parameters to easily extract bump times
#10
GWeindel
closed
2 years ago
1
Check PCA sign inversion and effect on bump location
#9
GWeindel
closed
2 years ago
1
Generating raw data and fitting from scratch
#8
GWeindel
closed
2 years ago
1
Ease/automate condition wise estimation
#7
GWeindel
closed
2 years ago
0
Iterative fit fails for the expected max number of bumps
#6
GWeindel
closed
2 years ago
0
xarray's need for equal dimension size generates some specific adjustments in the recovery of the results in the code
#4
GWeindel
closed
2 years ago
1
Add the stepwise back-roll estimation of bumps
#2
GWeindel
closed
2 years ago
1
Changing gamma initial parameters doesn't create a difference and magnitudes barely
#1
GWeindel
closed
2 years ago
1
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