issues
search
GabrielHoffman
/
dreamlet
Perform differential expression analysis on multi-sample single cell datasets using linear mixed models
https://gabrielhoffman.github.io/dreamlet
20
stars
4
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
exp vs ctrl group, but ordered categorical for experimental only
#24
tweagles1
opened
1 month ago
0
Resync the package with the most recent developments in packages SparseArray and DelayedArray
#23
hpages
closed
3 weeks ago
2
Different use of random / fixed effects throughout dreamlet processing in example scripts?
#22
berniejmulvey
opened
2 months ago
1
Multiple treatment groups
#21
jindalk
opened
3 months ago
2
question about AIC calculation
#20
jenellewallace
closed
3 months ago
2
Model Coefficients not estimable problem
#19
gjones3339
closed
2 months ago
5
run_mash fails when multiple coefficients provided to coefList
#18
kennethabarr
closed
4 months ago
3
Returning informative errors from lme4
#17
jenellewallace
opened
5 months ago
1
About formula for differential expression analysis using dreamlet
#16
RJ-Lupin
closed
7 months ago
1
dreamlet::processAssays() default values changing depending on the package and R version, which ones do you recommend?
#15
aidarripoll
closed
4 months ago
6
Get sample/gene statistics on the arguments (min.cells, min.count, min.samples, min.prop) in the processAssays() function
#14
aidarripoll
closed
10 months ago
2
voomWithDreamWeights - Error in weightsMatrix * out$weights: non-conformable arrays
#13
AnnaSophieFroehlich
closed
10 months ago
6
feature request: plot normalized expression values
#12
xanibas
closed
7 months ago
3
Providing different covariates for different populations during dreamletCompareClusters
#11
leqi0001
closed
1 year ago
2
0.99.14
#10
GabrielHoffman
closed
1 year ago
0
Master
#9
GabrielHoffman
closed
1 year ago
0
fix deps
#8
GabrielHoffman
closed
1 year ago
0
0.99.13
#7
GabrielHoffman
closed
1 year ago
0
Retrieve genes from the dreamletResult class
#6
michalmark
closed
1 year ago
1
Missing groups in one cell-type
#5
canergen
closed
1 year ago
5
Error when using fitVarPart() with a mixed model
#4
aidarripoll
closed
1 year ago
2
Devel
#3
GabrielHoffman
closed
1 year ago
0
Addition of aggregateVar function
#2
hoondy
closed
1 year ago
0
Update plotGeneHeatmap.R
#1
hoondy
closed
1 year ago
0