Hi,I want to use Augustus for de novo gene prediction, but when I was using the following command to train model parameters, I encountered an error message.
Here is the command : etraining --species=Soy_10_1 Soy_10_1.gene.gb.train --CRF=1 1>train.CRF.1.out 2>train.CRF.1.err
Here is the error message in train.CRF.1.err file:
Hi,I want to use Augustus for de novo gene prediction, but when I was using the following command to train model parameters, I encountered an error message.
Here is the command : etraining --species=Soy_10_1 Soy_10_1.gene.gb.train --CRF=1 1>train.CRF.1.out 2>train.CRF.1.err
Here is the error message in train.CRF.1.err file:
etraining: ERROR FeatureCollection::esource: invalid source key: RM
When I remove the --CRF=1 parameter, it works well.
Could you help me solve the problem, thank you very.