BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
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No BUSCO score of BRAKER3 prediction result with protein data only #771
We ran BRAKER(ver. 3.0.7 docker) with rna-seq only and protein only separately at our termite genome. Here are the BUSCO score at inputs and outputs.
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| BUSCO(insecta_odb10)
-- | --
Genome | C:99.6%[S:97.3%,D:2.3%]
Result of RNA-seq only annotated | C:94.9%[S:74.0%,D:20.9%]
Result of protein only annotated | C:0.0%[S:0.0%,D:0.0%]
the protein evidenve used in BRAKER | C:99.9%[S:15.4%,D:84.5%]
Dear BRAKER Team,
We ran BRAKER(ver. 3.0.7 docker) with rna-seq only and protein only separately at our termite genome. Here are the BUSCO score at inputs and outputs. <html xmlns:v="urn:schemas-microsoft-com:vml" xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:x="urn:schemas-microsoft-com:office:excel" xmlns="http://www.w3.org/TR/REC-html40">
| BUSCO(insecta_odb10) -- | -- Genome | C:99.6%[S:97.3%,D:2.3%] Result of RNA-seq only annotated | C:94.9%[S:74.0%,D:20.9%] Result of protein only annotated | C:0.0%[S:0.0%,D:0.0%] the protein evidenve used in BRAKER | C:99.9%[S:15.4%,D:84.5%]