search

Gaius-Augustus / BRAKER

BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
Other
356 stars 79 forks source link

Does BRAKER3 support the annotation of chromosomes larger than 2 million base pairs? #862

Open octpalacios opened 4 weeks ago

octpalacios commented 4 weeks ago

Hi,

I'm working on annotating a large genome with three chromosomes ranging between 2 and 2.5 Gb in size. Can BRAKER handle chromosomes of this scale?

Thanks in advance.

KatharinaHoff commented 4 weeks ago

We have not tested this. Let me know how it goes.

Octavio M. Palacios-Gimenez @.***> schrieb am So. 22. Sept. 2024 um 13:43:

Hi,

I'm working on annotating a large genome with three chromosomes ranging between 2 and 2.5 Gb in size. Can BRAKER handle chromosomes of this scale?

Thanks in advance.

— Reply to this email directly, view it on GitHub https://github.com/Gaius-Augustus/BRAKER/issues/862, or unsubscribe https://github.com/notifications/unsubscribe-auth/AJMC6JBVANURCTPLOTJEAPTZX2UM5AVCNFSM6AAAAABOUPOO4OVHI2DSMVQWIX3LMV43ASLTON2WKOZSGU2DCMBTGUZTCMQ . You are receiving this because you are subscribed to this thread.Message ID: @.***>