Closed JuFengWang closed 1 year ago
galba.pl uses getconf to see how many threads your hardware provides. You can install getconf on Ubuntu with e.g.
apt-get install libc-bin
The Docker and Singularity container both have getconf. I will add the requirement to the README.md
Hi I tried to run galba.pl to annotate genome with command below:
galba.pl --threads 24 --species=test --genome=/soft/galba/example/genome.fa --prot_seq=/soft/galba/example/proteins.fa
But I get the error:.....
While the scripts work well with parameter
-prg=gth
.GALBA.log
Thank you for any help!