Closed joleneyue closed 12 months ago
Dear Developer,
i used TSEBRA to predict the genes and get the gtf file eventually.
i would like to extract the protein sequences from the gtf file, shall i use script gff2aa.pl, however, i do not find it anywhere under the tsebra installation guide.
Could you let me know the answer?
thanks A lot! Cheers, Jolene
@joleneyue check Augustus utilities script folder
Hi,
@bijendrabio is correct, here is the URL: https://github.com/Gaius-Augustus/Augustus/blob/master/scripts/gtf2aa.pl
Best, Lars
Dear Developer,
i used TSEBRA to predict the genes and get the gtf file eventually.
i would like to extract the protein sequences from the gtf file, shall i use script gff2aa.pl, however, i do not find it anywhere under the tsebra installation guide.
Could you let me know the answer?
thanks A lot! Cheers, Jolene