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GangCaoLab / CoolBox

Jupyter notebook based genomic data visualization toolkit.
https://gangcaolab.github.io/CoolBox/index.html
GNU General Public License v3.0
224 stars 37 forks source link

[feature request]collinear view #67

Open jksr opened 2 years ago

jksr commented 2 years ago

Could you provide a collinear view in CoolBox? will be very helpful in comparative analysis.

I made something inspired by the jointview. code: https://github.com/jksr/CoolBox or https://gist.github.com/jksr/b9cd873f288b0827462fbc48d97bd38b testing case: image

This barely works ok for me, at least nothing visually wrong. but I'm not sure if the axes are complete aligned and styling could be improved. It definitely will be very helpful if this is officially supported.

Nanguage commented 2 years ago

Looks good! I will try to support this.

rdacemel commented 1 year ago

I think this would be wonderful. To have coolbox + pygenomeviz (https://github.com/moshi4/pyGenomeViz) features together (or at least compatible so one can create a matplotlib figure combining both) would be a game changer for me!