search

GangCaoLab / CoolBox

Jupyter notebook based genomic data visualization toolkit.
https://gangcaolab.github.io/CoolBox/index.html
GNU General Public License v3.0
224 stars 37 forks source link

cool #86

Closed Zheng19w closed 1 year ago

Zheng19w commented 1 year ago

Hello, I have an mcool file, but it contains X and Y sex chromosomes, as well as some scafold. Is there any way to remove them and only keep autosomes 1 to 18 image

zhqu1148980644 commented 1 year ago

check cooler project in github for details, they provide API/CLI that can achieve your goal.