Open EfraMP opened 3 months ago
In the Snakemake workflow for ichorCNA wiki webpage it's stated that:
If you do not wish to model subclonal events, then use ichorCNA_scStates: c() and ichorCNA_estimateClonality: TRUE. This is clearly a mistake, isn't it? The flag should be FALSE, right?
ichorCNA_scStates: c() and ichorCNA_estimateClonality: TRUE
FALSE
I'm asking here because the original repo seems abandoned.
In the Snakemake workflow for ichorCNA wiki webpage it's stated that:
If you do not wish to model subclonal events, then use
ichorCNA_scStates: c() and ichorCNA_estimateClonality: TRUE. This is clearly a mistake, isn't it? The flag should beFALSE, right?I'm asking here because the original repo seems abandoned.