GenSpectrum / LAPIS-SILO

Sequence Indexing engine for Large Order of genomic data
GNU Affero General Public License v3.0
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System security upgrades in Docker images #530

Open pflanze opened 1 month ago

pflanze commented 1 month ago

This is about system level security upgrades that come from upstream Ubuntu via apt update && apt dist-upgrade -y.

Since PR #519, the (now Ubuntu) base image is already being upgraded while our docker images are being built. But there is no upgrade happening while it is running. This is not good if the docker image runs for a long time before being replaced with a new one. How this should be improved, is to be decided. Review what other docker users do may be useful.

As discussed in the dev meeting today:

Further points:

Taepper commented 1 month ago

@chaoran-chen mentioned that we should rebuild images using intervals of 1-2 days, such that we always have images with recent security updates installed

pflanze commented 1 month ago

That is mentioned above as "a stop-gap measure (decided?) is to just rebuild new docker images every day".

Taepper commented 1 month ago

Oh, I see. Missed out on that one