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GenSpectrum / cov-spectrum-website

A web platform to detect and analyze variants of SARS-CoV-2
https://cov-spectrum.org
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Query with `.` no longer searches for unmutated #938

Closed corneliusroemer closed 6 months ago

corneliusroemer commented 6 months ago

Before the recent LAPIS changes, when querying for something like 23271. it showed all sequences that had 23271 genotype of reference/unmutated.

This no longer seems to be the case. I get almost nothing for 23271. but lots for 23271C (C being reference):

https://cov-spectrum.org/explore/World/AllSamples/Past3M/variants?nucMutations=23271C&:

image

https://cov-spectrum.org/explore/World/AllSamples/Past3M/variants?nucMutations=23271.&:

image
JonasKellerer commented 6 months ago

This should be fixed by https://github.com/GenSpectrum/LAPIS-SILO/pull/341 .

JonasKellerer commented 6 months ago

https://github.com/GenSpectrum/LAPIS-SILO/pull/341 is merged. Lets wait for the next update of SILO for production. Then we can check again and hopefully close this.

JonasKellerer commented 6 months ago

After restart both urls you provided show the same count. So I close this issue.