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GeneDx / phenopy

Phenotype comparison tools using semantic similarity.
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Disease weights #19

Closed arvkevi closed 5 years ago

arvkevi commented 5 years ago

This PR adds the disease weights functionality. Disease weights should only be implemented when performing phenopy score (disease prioritization).

codecov-io commented 5 years ago

Codecov Report

Merging #19 into develop will increase coverage by 2.15%. The diff coverage is 70.31%.

Impacted file tree graph

@@             Coverage Diff             @@
##           develop      #19      +/-   ##
===========================================
+ Coverage    69.13%   71.28%   +2.15%     
===========================================
  Files            9        9              
  Lines          567      613      +46     
===========================================
+ Hits           392      437      +45     
- Misses         175      176       +1
Flag Coverage Δ
#unittests 71.28% <70.31%> (+2.15%) :arrow_up:
Impacted Files Coverage Δ
phenopy/__main__.py 0% <0%> (ø) :arrow_up:
phenopy/obo.py 88.52% <100%> (+0.8%) :arrow_up:
phenopy/network.py 80.95% <100%> (ø) :arrow_up:
phenopy/d2p.py 98% <100%> (+1.33%) :arrow_up:
phenopy/score.py 98.12% <85.71%> (+6.23%) :arrow_up:

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