Hi,
I am using the genemania app on Cytoscape to generate a network of gene interactions. My settings for attribute limit and gene limit are both 0. The interaction network generated shows tow columns in the edge table for weighing interactions - 1) raw weight: a list of weights 2) normalized weight.
ts14071234
commented
3 months ago
Hi, I am using the genemania app on Cytoscape to generate a network of gene interactions. My settings for attribute limit and gene limit are both 0. The interaction network generated shows tow columns in the edge table for weighing interactions - 1) raw weight: a list of weights 2) normalized weight.
How do I interpret this weight and filter my interaction data based on an arbitrary score? The FAQ page does not answer this, it says 'Coming soon': http://pages.genemania.org/faq/#how-do-i-interpret-the-network-weights