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Genentech / gReLU

gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
https://genentech.github.io/gReLU/
MIT License
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Can't view available models #46

Closed Al-Murphy closed 1 month ago

Al-Murphy commented 2 months ago

I followed the weights and biases link to inspect the available models from this tutorial. However, I was met with this:

image

Is there another way to list all available models? Also, how do you plan to upkeep the available models going forward? How does this approach differ to what kipoi was trying to do?

Cheers! Alan.

avantikalal commented 1 month ago

Hi @Al-Murphy , you can list all available models using these function:

https://github.com/Genentech/gReLU/blob/main/src/grelu/resources/__init__.py#L77 lists all available projects in the zoo https://github.com/Genentech/gReLU/blob/main/src/grelu/resources/__init__.py#L125 lists all available model objects within a project

Do these solve the problem?

Al-Murphy commented 1 month ago

Hi, apologies on my late reply (I was in the middle of final edits and submission my thesis) - Yes, this answers my question, thanks!