GenomicsAotearoa / Pangenome-Graphs-Workshop

This repository contains material to construct pangenome graphs for a small bacteria dataset detailing every step in the Nesi environment.
https://genomicsaotearoa.github.io/Pangenome-Graphs-Workshop/
GNU General Public License v2.0
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add a note on how to save intermediate graphs during pggb-odgi runs #20

Open DininduSenanayake opened 1 year ago

DininduSenanayake commented 1 year ago

few sample commands and outputs with -A OR --keep-temp-files