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GenomicsAotearoa
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metagenomics_summer_school
Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in December
https://genomicsaotearoa.github.io/metagenomics_summer_school/
GNU General Public License v3.0
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Final aesthetics and fixes
#51
JSBoey
closed
11 months ago
0
Update based on Kim's edits
#50
JSBoey
closed
11 months ago
0
Aesthetics for days 3 and 4
#49
JSBoey
closed
11 months ago
0
Aesthetics for day 2
#48
JSBoey
closed
11 months ago
0
Aesthetics update for day 1
#47
JSBoey
closed
11 months ago
0
Update based on Dave's comments
#46
JSBoey
closed
11 months ago
1
Update based on Mike's comments
#45
JSBoey
closed
11 months ago
0
Add and format Valter's phylogenetics episode
#44
JSBoey
closed
11 months ago
0
Re-enable markdown grid tables
#43
JSBoey
closed
11 months ago
0
Remove grid tables
#42
JSBoey
closed
11 months ago
0
Update timetable for 2023
#41
JSBoey
closed
11 months ago
0
Move exercise to ex10
#40
JSBoey
closed
11 months ago
0
Update mike
#39
JSBoey
closed
11 months ago
0
Add Virtual Desktop for VizBin
#38
JSBoey
closed
11 months ago
0
Mike's update to virus materials
#37
JSBoey
closed
11 months ago
0
MaxBin missing libraries in milan but not in large
#36
JSBoey
opened
11 months ago
4
Create LICENSE
#35
DininduSenanayake
closed
1 year ago
0
Update R package when running DAS_Tool module OR update DAS_module
#34
JSBoey
closed
1 year ago
4
Create MGSS2021_Archive branch
#33
DininduSenanayake
closed
1 year ago
0
Update coverage normalisation script(s)
#32
mlhoggard
opened
1 year ago
5
Update viral processing steps to VirSorter2 and DRAM-v
#31
mlhoggard
opened
1 year ago
2
Install Signal-P
#30
DininduSenanayake
closed
1 year ago
5
Migrate the repo to MkDocs-material
#29
DininduSenanayake
closed
1 year ago
0
Upgrade DRAM
#28
DininduSenanayake
closed
1 year ago
3
Find and replace all Slurm variables from their abbreviated format to expanded
#27
DininduSenanayake
closed
1 year ago
0
Update Software versions and corresponding databases
#26
DininduSenanayake
closed
1 year ago
1
workshop info
#25
khemlalnirmalkar
closed
2 years ago
0
add project code to Jupyter Login
#24
DininduSenanayake
closed
3 years ago
0
add project code
#23
DininduSenanayake
closed
3 years ago
0
image fix on Jupyter troubleshooting page
#22
DininduSenanayake
closed
3 years ago
0
image fix on jupyter troubleshooting page
#21
DininduSenanayake
closed
3 years ago
0
Add jupyter troubleshooting page
#20
DininduSenanayake
closed
3 years ago
0
add Jupyter Troubleshooting page
#19
DininduSenanayake
closed
3 years ago
0
slurm schematic change, file prefixes reverted to SRR, warning about IE
#18
DininduSenanayake
closed
3 years ago
0
change intro to command line .fastq filenames to SRR prefix
#17
DininduSenanayake
closed
3 years ago
0
Change SLURM schematic
#16
DininduSenanayake
closed
3 years ago
0
add a warning about IE
#15
DininduSenanayake
closed
3 years ago
0
Merging 2020_DEV into master
#14
mlhoggard
closed
3 years ago
0
add ~/.ssh/config image
#13
DininduSenanayake
closed
3 years ago
0
terminal&Jupyter_Login information
#12
DininduSenanayake
closed
3 years ago
0
remove --partition from all slurm scripts
#11
DininduSenanayake
closed
3 years ago
0
remove --ga_bigmem
#10
DininduSenanayake
closed
3 years ago
0
remove --ga_bigmem
#9
DininduSenanayake
closed
3 years ago
0
remove --ga_bigmem
#8
DininduSenanayake
closed
3 years ago
0
ex7_initial_binning - clarification of text
#7
chrstraub
closed
4 years ago
0
ex4_assembly.md - fix typos
#6
chrstraub
closed
4 years ago
0
fixed typos and trimmomatic command
#5
chrstraub
closed
4 years ago
0
fixed typos
#4
chrstraub
closed
4 years ago
0
Update ex1_bash_scripting.md
#3
foreal17
closed
4 years ago
0
Editing Intro to commandline
#2
foreal17
closed
4 years ago
0
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