On a machine level when running specific instruments for example on a miseq should this also include information about the output? read length, number of reads, ..
We could make a summary for the different devices/formats what the preferred information content could be.
For example
Sequencing output (fixed read length e.g. illumina):
Quality Score Encoding
number of reads
number of bases
average quality?
read length
Sequencing output (variable read length e.g. pacbio):
On a machine level when running specific instruments for example on a miseq should this also include information about the output? read length, number of reads, .. We could make a summary for the different devices/formats what the preferred information content could be.
For example
Sequencing output (fixed read length e.g. illumina):
Sequencing output (variable read length e.g. pacbio):