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GenomicsStandardsConsortium / mixs

Minimum Information about any (X) Sequence” (MIxS) specification
https://w3id.org/mixs
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Updating 'Section' across checklists and packages #139

Open lschriml opened 3 years ago

lschriml commented 3 years ago

@only1chunts

I've gone through the checklists and packages, double checked (and adjusted where needed), the column order, and added 'Section' where it was missing.

Chris -- can you please review and update the 'Section' Columns in MIxS 6 core, packages, new MIxS-Food package, 3 checklists: MIMAG, MISAG, MIUVIG, and in new [nearly finished] checklist: SARS-CoV-2 and packages: MIxS-Ag, MIxS-SA, MIxS- positive and negative controls

only1chunts commented 3 years ago

I think we need to discuss the usage and requirements of the "Sections" information in the CIG and then decide how/if we want to populate it. For now, by default we can use "environment" as the section value of terms that appear only in the packages, and terms that are in the "core" sheet all have individual values given already. I will label this as discuss for v7, and remove from the v6 project.

ramonawalls commented 9 months ago

@only1chunts have we gotten rid of sections yet? Can we close this, or should we discuss more?

only1chunts commented 9 months ago

from memory, the various discussions we've had (in particular around the recent book chapter) all point to making better use of the sections, i.e. definitely not removing them, just better defining them and appropriately using them on all terms/slots.