GenomicsStandardsConsortium / mixs

Minimum Information about any (X) Sequence” (MIxS) specification
https://w3id.org/mixs
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new term samp_source_mat_cat [MIXS:0001154] has two different definitions #210

Closed only1chunts closed 3 years ago

only1chunts commented 3 years ago

Current term details In the NewFoodPackages tab in the MIXS6 spreadsheet the term samp_source_mat_cat [MIXS:0001154] has been given different definitions and expected values for two of the individual packages:

Term name - sample source material category
Term ID - MIXS:0001154
Structured comment name - samp_source_mat_cat
Value syntax - {termLabel} {[termID]}

Packages - food-human foods, food-animal and animal feed, & food-farm environment Definition - This is the scientific role or category that the subject organism or material has with respect to an investigation. This field accepts terms listed under specimen source material category (http://purl.obolibrary.org/obo/GENEPIO_0001237). Expected value - GENEPIO:0001237 Example - environmental (swab or sampling) [GENEPIO:0001732]

Packages - food-food production facility Definition - This is the scientific role or category that the subject organism or material has with respect to an investigation. This field accepts terms listed under specimen (http://purl.obolibrary.org/obo/OBI_0100051).
Expected value - OBI:0100051 Example - environmental swab specimen [OBI:0002613]

Suggested update(s) We need there to be a single definition to work for all packages. please can someone create that?

only1chunts commented 3 years ago

This new term is included in #201

lschriml commented 3 years ago

Fixed: (http://purl.obolibrary.org/obo/GENEPIO_0001237 or http://purl.obolibrary.org/obo/OBI_0100051).