GenomicsStandardsConsortium / mixs

Minimum Information about any (X) Sequence” (MIxS) specification
https://w3id.org/mixs
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compl_score "low;{percentage}" #368

Open turbomam opened 2 years ago

turbomam commented 2 years ago

compl_score_enum

Which is this supposed to be ?

Example makes it look like both are required

field value
Structured comment name compl_score
Item (rdfs:label) completeness score
Definition Completeness score is typically based on either the fraction of markers found as compared to a database or the percent of a genome found as compared to a closely related reference genome. High Quality Draft: >90%, Medium Quality Draft: >50%, and Low Quality Draft: < 50% should have the indicated completeness scores
Expected value quality;percent completeness
Value syntax [high|med|low];{percentage}
Example med;60%
Section sequencing
migs_eu X
migs_ba X
migs_pl X
migs_vi X
migs_org X
mims -
mimarks_s -
mimarks_c -
misag M
mimag M
miuvig C
Preferred unit  
Occurence 1
MIXS ID MIXS:0000069
MIGS ID (mapping to GOLD)  
turbomam commented 2 years ago

The numeric part of this: ^(high|med|low);(0|([0-9]{1,2})|100)%$

can be 0, 1-99, or 100. No decimals.