GenomicsStandardsConsortium / mixs

Minimum Information about any (X) Sequence” (MIxS) specification
https://w3id.org/mixs
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New term proposal : gradient_pos_rel_am #582

Open mslarae13 opened 1 year ago

mslarae13 commented 1 year ago

New term details For us to assess a new term request we require the following details:

Term name - relative amount of nucleic acids in the gradient position
Structured comment name - gradient_pos_rel_am
Definition - Percent of total nucleic acids loaded onto the column in this fraction. If uploading 16S rRNA gene (or other amplicon) sequencing data, this value should be calculated from qPCR data. If uploading untargetted sequencing data, this value should be calculated from total DNA concentration.
Expected value - value
Value syntax - {flot} %
Example - 10%
Preferred unit - percent
Package(s) -new checklist term applicable to all packages / extensions

Additional context Add any other context about the new term here.

simpso91 commented 1 year ago

Term name - Relative amount of nucleic acids in the gradient position Structured comment name - gradient_pos_rel_am5 Definition - Percent of total nucleic acids loaded onto the column in this fraction. If uploading 16S rRNA gene (or other amplicon) sequencing data, this value should be calculated from qPCR data. If uploading untargetted sequencing data, this value should be calculated from total DNA concentration. Expected value - value Value syntax - {float} % Example - 10% Preferred unit - percent

Also, we would like to change the structured comment name for this term to "gradient_pos_rel_amt"