Implementation of FBA - Githubissues

GeomScale / dingo

A python library for metabolic networks sampling and analysis

GNU Lesser General Public License v3.0

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Implementation of FBA #3

Closed TolisChal closed 3 years ago

TolisChal commented 3 years ago

This PR implements the FBA method to analyze a metabolic network.

It provides two functions: -- slow_fba which uses the function scipy.optimize.linprog to solve the linear program required. -- fast_fba which uses the gurobi solver for the linear program required.