rename biomass_function to objective_function, fixes issue #82

GeomScale / dingo

A python library for metabolic networks sampling and analysis

GNU Lesser General Public License v3.0

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rename biomass_function to objective_function, fixes issue #82 #97

Closed hritikb closed 4 months ago

hritikb commented 5 months ago

I have renamed the biomass_function to objective_function in dingo/MetabolicNetwork.py, dingo/PolytopeSampler.py, tutorials/dingo_tutorial.ipynb and README.md. This fixes issue #82. I have run all the unit tests independent of gurobipy, i.e. all except rounding.py and fast_implementation_test.py.