dea/20181015 require updated python conda packages. Also, a fix for dea-env build dependencies issues.
Proposed solutions
raijin_scripts/deploy/build_environment_module.py: Refactor code and update comments within the file
raijin_scripts/deploy/dea-env/environment.yaml: To resolve issues with dea-env build packages, ensure packages are installed using conda instead of pip. If packages are not available within conda distribution packages, go with pip install.
raijin_scripts/deploy/dea-env/environment.yaml: Add new python conda packages: openmpi, qgis, rsgislib
raijin_scripts/deploy/dea-env/modulespec.yaml: Install pip packages during environment packaging
raijin_scripts/deploy/dea-env/pip_install_packages.txt: Add the following packages as part of pip install during dea environment build:
celery
checksumdir
click-datetime
DAWG
ffmpeg-python
hdmedians
jinja2
meinheld
pyDEM
raijin_scripts/deploy/reinstall_miniconda.sh: Remove pip and rsgislibcondainstall commands
Reason for this pull request
dea/20181015require updated pythoncondapackages. Also, a fix fordea-envbuild dependencies issues.Proposed solutions
raijin_scripts/deploy/build_environment_module.py: Refactor code and update comments within the fileraijin_scripts/deploy/dea-env/environment.yaml: To resolve issues withdea-envbuild packages, ensure packages are installed usingcondainstead ofpip. If packages are not available withincondadistribution packages, go withpipinstall.raijin_scripts/deploy/dea-env/environment.yaml: Add new python conda packages:openmpi,qgis,rsgislibraijin_scripts/deploy/dea-env/modulespec.yaml: Installpippackages during environment packagingraijin_scripts/deploy/dea-env/pip_install_packages.txt: Add the following packages as part of pip install duringdeaenvironment build:celerychecksumdirclick-datetimeDAWGffmpeg-pythonhdmediansjinja2meinheldpyDEMraijin_scripts/deploy/reinstall_miniconda.sh: Removepipandrsgislibcondainstallcommandsraijin_scripts/deploy/requirements.txt: Deleterequirements.txtfile