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GergelyTuri / tFC-rig

trace fear conditioning rig
GNU General Public License v3.0
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creating a proper anaconda environment #27

Closed GergelyTuri closed 3 months ago

GergelyTuri commented 6 months ago

Need to create a proper anaconda environment for running the python scripts. this requires a requirements or environment.yml file. The current environment file is specific to linux which makes installation difficult.

cpaynerogers commented 4 months ago

@GergelyTuri I got setup on my Windows computer at home and I was able to install a Conda environment using our Software/environment.yml without any issues. Can you provide more specific details for this GitHub issue when you have a chance? Happy to help if I can

(cued-fc) C:\Users\colin\Desktop\proj\tFC-rig\Software>conda env list
# conda environments:
#
base                     C:\Users\colin\anaconda3
cued-fc               *  C:\Users\colin\anaconda3\envs\cued-fc

(cued-fc) C:\Users\colin\Desktop\proj\tFC-rig\Software>conda list
# packages in environment at C:\Users\colin\anaconda3\envs\cued-fc:
#
# Name                    Version                   Build  Channel
bzip2                     1.0.8                hcfcfb64_5    conda-forge
ca-certificates           2024.2.2             h56e8100_0    conda-forge
colorama                  0.4.6                    pypi_0    pypi
intel-openmp              2024.0.0         h57928b3_49841    conda-forge
libblas                   3.9.0              21_win64_mkl    conda-forge
libcblas                  3.9.0              21_win64_mkl    conda-forge
libffi                    3.4.2                h8ffe710_5    conda-forge
libhwloc                  2.9.3           default_haede6df_1009    conda-forge
libiconv                  1.17                 hcfcfb64_2    conda-forge
liblapack                 3.9.0              21_win64_mkl    conda-forge
libsqlite                 3.45.2               hcfcfb64_0    conda-forge
libxml2                   2.12.6               hc3477c8_0    conda-forge
libzlib                   1.2.13               hcfcfb64_5    conda-forge
mkl                       2024.0.0         h66d3029_49657    conda-forge
numpy                     1.24.4           py38h1d91fd2_0    conda-forge
openssl                   3.2.1                hcfcfb64_1    conda-forge
pandas                    2.0.3            py38hf08cf0d_1    conda-forge
pip                       24.0               pyhd8ed1ab_0    conda-forge
pthreads-win32            2.9.1                hfa6e2cd_3    conda-forge
pyserial                  3.5                      pypi_0    pypi
python                    3.8.19          h4de0772_0_cpython    conda-forge
python-dateutil           2.9.0              pyhd8ed1ab_0    conda-forge
python-tzdata             2024.1             pyhd8ed1ab_0    conda-forge
python_abi                3.8                      4_cp38    conda-forge
pytz                      2024.1             pyhd8ed1ab_0    conda-forge
setuptools                69.2.0             pyhd8ed1ab_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
tbb                       2021.11.0            h91493d7_1    conda-forge
tk                        8.6.13               h5226925_1    conda-forge
tqdm                      4.66.1                   pypi_0    pypi
ucrt                      10.0.22621.0         h57928b3_0    conda-forge
vc                        14.3                hcf57466_18    conda-forge
vc14_runtime              14.38.33130         h82b7239_18    conda-forge
vs2015_runtime            14.38.33130         hcb4865c_18    conda-forge
wheel                     0.42.0             pyhd8ed1ab_0    conda-forge
xz                        5.2.6                h8d14728_0    conda-forge
GergelyTuri commented 3 months ago

thanks, i, too, tried this yesterday on a PC and it worked. will close this.