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GfellerLab / EPIC

Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.
https://gfellerlab.shinyapps.io/EPIC_1-1/
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This version is not compatible with R >=4.0.0 #12

Closed yhren1994 closed 2 years ago

yhren1994 commented 2 years ago

Hi there, It seems that this version of EPIC could only work on R<=3.6.3. Therefore, I hope there will be a new version which could work on R >=4.0.0. Many thanks! yhren

jracle85 commented 2 years ago

Hello,

I'm using EPIC with R 4.0.2 and it works.

What is the issue that you're Having? It seems that sometimes an issue comes during the installation with devtools::install_github("GfellerLab/EPIC", build_vignettes=TRUE)

In such a case if you set build_vignettes=FALSE instead of TRUE could help (and this issue possibly also disappears if the different installed packages are updated prior to installation, allowing to keep the build_vignettes=TRUE).

I hope this works for you!

Best wishes,

Julien

yhren1994 commented 2 years ago

Hello,

I'm using EPIC with R 4.0.2 and it works.

What is the issue that you're Having? It seems that sometimes an issue comes during the installation with devtools::install_github("GfellerLab/EPIC", build_vignettes=TRUE)

In such a case if you set build_vignettes=FALSE instead of TRUE could help (and this issue possibly also disappears if the different installed packages are updated prior to installation, allowing to keep the build_vignettes=TRUE).

I hope this works for you!

Best wishes,

Julien

It works! Thanks a lot!