Use of <<< redirect fails on Ubuntu

GiantSpaceRobot / FindFungi

A pipeline for the identification of fungi in public metagenomics datasets

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Use of <<< redirect fails on Ubuntu #10

Closed kescobo closed 5 years ago

kescobo commented 5 years ago

Started at Thu 31 Oct 2019 10:58:15 AM EDT
./FindFungi-v0.23.3/FindFungi-0.23.3.sh: 193: ./FindFungi-v0.23.3/FindFungi-0.23.3.sh: Syntax error: redirection unexpected

According to this, the default shell on Ubuntu is dash not bash, and <<< isn't valid. Changing the shebang to #!/bin/bash worked.

GiantSpaceRobot commented 5 years ago

Thanks, updating now!