Build database script compilation error

jjoropezav commented 5 months ago

Hello!

Tried running build_kraken.nf

found this error:

N E X T F L O W ~ version 23.10.1 Launching build_kraken.nf [extravagant_lorenz] DSL2 - revision: 4867f6b59d ERROR ~ Script compilation error

file : /scratch/home/joropeza/medi/build_kraken.nf
cause: Unexpected input: '{' @ line 149, column 10. workflow { ^

1 error

NOTE: If this is the beginning of a process or workflow, there may be a syntax error in the body, such as a missing or extra comma, for which a more specific error message could not be produced.

-- Check '.nextflow.log' file for details

Attached is the nextflow log

Thanks for the help .nextflow.log

cdiener commented 5 months ago

Sorry, about that. I will send in a fix.

cdiener commented 5 months ago

Should be fixed now.

Gibbons-Lab / medi

Build database script compilation error #9