debug, new modules, and code improvements - Githubissues

GilbertLabUCSF / CanDI

CanDI - A global cancer data integrator

http://candi.rtfd.io/

MIT License

6 stars 4 forks source link

debug, new modules, and code improvements #46

Closed abearab closed 5 months ago

abearab commented 5 months ago

Switch from python 3.9 to >3.11
Update README
Added load function for coessentiality

related to #45

Made Manager the parent class and include subclasses
Fixed imports and installations
Add functional candi-install and candi-uninstall scripts to CLI

close #41

Removed R scripts for DESeq2 analysis
Add pipeline folder, started with diffexp module

close #39