GilbertLabUCSF / ScreenPro2

[This is an archived repository, see the current version in Arc Institute GitHub]
https://github.com/ArcInstitute/ScreenPro2
MIT License
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How to use growth values (population doublings/doubling differences) #24

Closed abearab closed 9 months ago

abearab commented 10 months ago
abearab commented 9 months ago

https://www.pnas.org/doi/10.1073/pnas.1307002110

Figure 2. Quantitative framework for quantitative phenotypes from pooled screens.


Method section: Determination of shRNA Phenotypes from Pooled Screens.

abearab commented 9 months ago

somewhere in Kampmann et al., PNAS (2013):

In experiments with k∼0, rho is not a useful measure, and instead we use the differential growth metric tau, defined as: ...