GoekeLab / m6anet

Detection of m6A from direct RNA-Seq data
https://m6anet.readthedocs.io/
MIT License
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Question about the PCA in the paper #149

Open huawen-poppy opened 8 months ago

huawen-poppy commented 8 months ago

Hi, in your paper you mentioned that: 'We then performed a principal component analysis (PCA) on the high-dimensional read-level features to map reads into a two-dimensional space'. could you please tell me what is the input for the PCA? is it the readcount table from datapreparation step?

Thank you very much!