GoekeLab / m6anet

Detection of m6A from direct RNA-Seq data
https://m6anet.readthedocs.io/
MIT License
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Update dataprep #3

Closed yuukiiwa closed 3 years ago

yuukiiwa commented 3 years ago

Hi @chrishendra93, I have modified the xpore dataprep to suit the demo dataset for m6anet. Here are the outputs from calling dataprep: Screenshot 2021-02-05 at 7 31 55 PM The data.json right now looks like this in the format of {tx_id:{tx_position:{k_mer:[norm_mean]}}}: Screenshot 2021-02-05 at 7 27 03 PM I have some problems outputting a list of tuples, which is here. Thanks!