how to prepare promoterAnnotationData?

GoekeLab / proActiv

Estimation of Promoter Activity from RNA-Seq data

https://goekelab.github.io/proActiv/

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how to prepare promoterAnnotationData? #2

Closed xflicsu closed 4 years ago

xflicsu commented 4 years ago

Hello proActiv developer, This tool provides a powerful method to identify altnative promoter. I try to prepare promoterAnnotationData with human genome hg38 with v29 gene information from GENCODE project. I created locus of several alnative promoter. Now how to prepare the object of promoterAnnotationData? Thanks for your attention!

xflicsu commented 4 years ago

I find you have provided some script to output that object. Thanks!