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GoekeLab / sg-nex-data

Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project
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Data Release? #10

Closed mikecuoco closed 3 years ago

mikecuoco commented 3 years ago

I was hoping to take a look at the raw data of this project. However, the links to the fastq and bam files in DATA.md don't appear to be working. Are you waiting for publication for that data to be available, despite your posted preprint?

jonathangoeke commented 3 years ago

Hi @mikecuoco the data was available for quite some time already, that seems to be a problem with the links. The data is currently hosted on Dropbox, and I tried to update the links, but that did not solve the problem, so I assume that this is a temporary error on Dropbox. I will post an update here once that is fixed. You can download the data from ENA in the meantime: https://www.ebi.ac.uk/ena/browser/view/PRJEB44348

mikecuoco commented 3 years ago

@jonathangoeke oh great! Thank you.