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GoekeLab / sg-nex-data

Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project
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Add FLAIR tutorial #40

Closed cafelton closed 1 year ago

cafelton commented 1 year ago

Thanks for the opportunity to contribute, your data is a great boon to the long-read RNA-seq field. By the way, I noticed that the way your other tutorials and templates install the aws cli does not work for me, so I used pip install awscli instead.

cafelton commented 1 year ago

Thanks for looking over it! I accepted all changes and I think that your adding timing expectations will help a lot.

Best, Colette Felton Brooks Lab Biomolecular Engineering and Bioinformatics UCSC

On Wed, Aug 23, 2023 at 9:22 PM Chen Ying @.***> wrote:

@.**** commented on this pull request.

Hi @cafelton https://github.com/cafelton , there is only some issue in directing to the subset files, where I first could not get it run. I have suggested my solution to those code lines and added a few note sentences to indicate the slower code chunks so that users have a running time expectation for those parts.

Other than that, everything reads very nicely to me and the tutorial is quite comprehensive and very instructive.

Thank you Ying

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